Stem-loop sequence cfa-mir-299

Accession MI0010384
Description Canis familiaris miR-299 stem-loop
Gene family MIPF0000186; mir-299
Stem-loop 
     a                      uu 
aagaa ugguuuaccgucccacauacau  u
||||| ||||||||||||||||||||||  g
uucuu gccaaauggcaggguguaugua  a
     c                      ug
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Genome context
Coordinates (CanFam2) Overlapping transcripts
chr8: 72298281-72298343 [+]
sense
ENSCAFT00000029139 ; 3'UTR (exon 5)
Clustered miRNAs
< 10kb from cfa-mir-299
cfa-mir-379 chr8: 72296541-72296599 [+]
cfa-mir-411 chr8: 72297827-72297884 [+]
cfa-mir-299 chr8: 72298281-72298343 [+]
cfa-mir-380 chr8: 72299497-72299553 [+]
cfa-mir-323 chr8: 72300227-72300282 [+]
cfa-mir-758 chr8: 72300515-72300595 [+]
cfa-mir-329b chr8: 72301261-72301340 [+]
cfa-mir-329a chr8: 72301588-72301647 [+]
cfa-mir-494 chr8: 72304118-72304198 [+]
cfa-mir-543 chr8: 72306139-72306196 [+]
cfa-mir-495 chr8: 72307902-72307959 [+]

Mature sequence cfa-miR-299

Accession MIMAT0009885
Sequence

7 -  

ugguuuaccgucccacauacau

 - 28

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Evidence by similarity; MI0000399
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).