Stem-loop sequence cfa-mir-18b

AccessionMI0010323 (change log)
DescriptionCanis familiaris miR-18b stem-loop
Gene family MIPF0000001; mir-17
Stem-loop
           --    u    c   u     -------u    a 
5' ccuguguu  aagg gcau uag gcagu        agug a
   ||||||||  |||| |||| ||| |||||        ||||  
3' ggacacgg  uucc cgua auc cguca        ucgc g
           cc    c    a   c     uccaagau    c 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CanFam3.1; GCA_000002285.2) Overlapping transcripts
chrX: 104896339-104896415 [-]
intergenic
Clustered miRNAs
< 10kb from cfa-mir-18b
cfa-mir-106achrX: 104896518-104896574 [-]
cfa-mir-18bchrX: 104896339-104896415 [-]
cfa-mir-20bchrX: 104896091-104896158 [-]
cfa-mir-19b-2chrX: 104895962-104896025 [-]
cfa-mir-92a-2chrX: 104895826-104895886 [-]
cfa-mir-363chrX: 104895657-104895723 [-]
Database links

Mature sequence cfa-miR-18b

Accession MIMAT0009831
Sequence

8 - 

uaaggugcaucuagugcaguua

 - 29

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Evidence by similarity; MI0001209
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).