Stem-loop sequence lgi-mir-100

Accession MI0010119
Description Lottia gigantea miR-100 stem-loop
Gene family MIPF0000025; mir-99
Stem-loop
---au   --uga            -a    g    uc   a      a  a 
     uag     cuaguuaauaua  accc uaga  cga cuugug ua a
     |||     ||||||||||||  |||| ||||  ||| |||||| || a
     auc     gaucgguuauau  uggg aucu  guu gaacgc gu u
uagac   uaugg            cc    g    uu   c      a  c 
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Genome context
Coordinates (JGI1) Overlapping transcripts
sca_16: 2793558-2793658 [-]
intergenic
Clustered miRNAs
< 10kb from lgi-mir-100
lgi-mir-100 sca_16: 2793558-2793658 [-]
lgi-let-7 sca_16: 2791958-2792058 [-]

Mature sequence lgi-miR-100

Accession MIMAT0009577
Sequence

21 - 

aacccguagauccgaacuugug

 - 42

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Evidence by similarity; MI0000102

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).