Stem-loop sequence lgi-mir-2d

Accession MI0010102
Description Lottia gigantea miR-2d stem-loop
Stem-loop
uaucugaaa      u u c   cu    -      -     a      -   a 
         guauuu g c cug  cuga ccaagu ggcug gauaag uuu u
         |||||| | | |||  |||| |||||| ||||| |||||| |||  
         uauaaa c g gac  gacu gguucg ccgac cuauuc aag u
-----caaa      - u u   uu    a      u     a      u   u 
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Genome context
Coordinates (JGI1) Overlapping transcripts
sca_2: 4520058-4520158 [+]
intergenic
Clustered miRNAs
< 10kb from lgi-mir-2d
lgi-mir-71 sca_2: 4515783-4515883 [-]
lgi-mir-2d sca_2: 4520058-4520158 [+]

Mature sequence lgi-miR-2d

Accession MIMAT0009559
Sequence

61 - 

uaucacagccugcuuggaucagu

 - 83

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Evidence not experimental

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).