Stem-loop sequence cte-mir-252b

Accession MI0010081
Previous IDs cap-mir-252b
Description Capitella teleta miR-252b stem-loop
Gene family MIPF0000285; mir-252
Stem-loop 
----ugcauc    -    aca   c          u cc        uacg 
          ucac ugug   gug uaaguaguag g  gcagguaa    u
          |||| ||||   ||| |||||||||| |  ||||||||    u
          agug gcac   cac auucgucguc c  cguccauu    a
uacaacaaua    c    gaa   a          u -a        uagu
Get sequence
Deep sequencing
11 reads, 1 experiments
Genome context
Coordinates (JGI1.0) Overlapping transcripts
scaffold_296: 190685-190785 [+]
intergenic
Clustered miRNAs
< 10kb from cte-mir-252b
cte-mir-2001 scaffold_296: 188007-188083 [+]
cte-mir-252b scaffold_296: 190685-190785 [+]
cte-mir-252a scaffold_296: 191474-191574 [+]

Mature sequence cte-miR-252b

Accession MIMAT0009537
Previous IDs cap-miR-252b
Sequence

21 -  

cuaaguaguagugccgcaggua

 - 42

Get sequence
Deep sequencing 11 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).