Stem-loop sequence cte-mir-216a

Accession MI0010079
Previous IDs cap-mir-216a
Description Capitella teleta miR-216a stem-loop
Gene family MIPF0000054; mir-216
Stem-loop 
uaa     ua          g      a   u  ugg 
   uuguc  aucucaguug uaauuc gag gc   a
   |||||  |||||||||| |||||| ||| ||    
   aacag  uagggucgac auuagg cuc ug   a
aua     gc          a      -   u  cuu
Get sequence
Deep sequencing
535 reads, 1 experiments
Genome context
Coordinates (JGI1.0) Overlapping transcripts
scaffold_192: 34749-34823 [-]
intergenic
Clustered miRNAs
< 10kb from cte-mir-216a
cte-mir-216a scaffold_192: 34749-34823 [-]
cte-mir-216b scaffold_192: 34358-34437 [-]
cte-mir-216c scaffold_192: 33990-34074 [-]
cte-mir-12 scaffold_192: 33822-33922 [-]

Mature sequence cte-miR-216a

Accession MIMAT0009535
Previous IDs cap-miR-216a
Sequence

9 -  

uaaucucaguugguaauucaga

 - 30

Get sequence
Deep sequencing 532 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).