Stem-loop sequence bfl-mir-217

Accession MI0010040
Description Branchiostoma floridae miR-217 stem-loop
Gene family MIPF0000077; mir-217
Stem-loop 
c    a   c     c      u      aug g 
 uggg cua ugcau aggaac gauugg   g a
 |||| ||| ||||| |||||| ||||||   |  
 acuc ggu acgua uccuug cuaacu   c u
c    -   -     c      u      aaa a
Get sequence
Deep sequencing
434 reads, 1 experiments
Genome context
Coordinates (JGI2.0) Overlapping transcripts
Bf_V2_29: 960802-960869 [-]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-217
bfl-mir-216 Bf_V2_29: 961712-961786 [-]
bfl-mir-217 Bf_V2_29: 960802-960869 [-]

Mature sequence bfl-miR-217

Accession MIMAT0009496
Sequence

8 -  

uacugcaucaggaacugauugga

 - 30

Get sequence
Deep sequencing 434 reads, 1 experiments
Evidence experimental; 454 [1]

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).