Stem-loop sequence bta-mir-655

AccessionMI0009882 (change log)
DescriptionBos taurus miR-655 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop
   aacu   cagg      ug           u      ua      cu   c 
5'     guu    gauauu  aggagagguua ccgugu  uguucg  ugg u
       |||    ||||||  ||||||||||| ||||||  ||||||  |||  
3'     cag    cuauaa  uucucuccaau gguaca  auaagu  acu c
   --cu   ---a      gu           u      ua      --   a 
Get sequence
Deep sequencing
885 reads, 0 reads per million, 63 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr21: 67865688-67865784 [+]
intergenic
Clustered miRNAs
< 10kb from bta-mir-655
bta-mir-376echr21: 67856314-67856395 [+]
bta-mir-376cchr21: 67856685-67856770 [+]
bta-mir-376dchr21: 67857059-67857140 [+]
bta-mir-654chr21: 67857212-67857292 [+]
bta-mir-376bchr21: 67857435-67857527 [+]
bta-mir-376achr21: 67857794-67857892 [+]
bta-mir-1185chr21: 67859743-67859828 [+]
bta-mir-3956chr21: 67860482-67860579 [+]
bta-mir-381chr21: 67861446-67861520 [+]
bta-mir-487bchr21: 67861931-67862014 [+]
bta-mir-539chr21: 67862745-67862822 [+]
bta-mir-544achr21: 67864731-67864821 [+]
bta-mir-655chr21: 67865688-67865784 [+]
bta-mir-411cchr21: 67867851-67867924 [+]
bta-mir-487achr21: 67868237-67868316 [+]
bta-mir-3578chr21: 67871246-67871331 [-]
bta-mir-382chr21: 67871251-67871326 [+]
bta-mir-134chr21: 67871630-67871702 [+]
bta-mir-668chr21: 67872162-67872257 [+]
bta-mir-485chr21: 67872328-67872400 [+]
bta-mir-453chr21: 67873059-67873138 [+]
Database links

Mature sequence bta-miR-655

Accession MIMAT0009360
Sequence

61 - 

auaauacaugguuaaccucucu

 - 82

Get sequence
Deep sequencing881 reads, 63 experiments
Evidence by similarity; MI0003677
Predicted targets

References

1
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).