Stem-loop sequence bta-mir-544a

Accession MI0009862
Description Bos taurus miR-544a stem-loop
Gene family MIPF0000436; mir-544
Stem-loop 
auuuu      cua    u           -     u   -ga  c 
     caucac   ggga cuuguuaaaag gcaga ucu   uu a
     ||||||   |||| ||||||||||| ||||| |||   ||  
     guagug   cccu gaacgauuuuu cgucu aga   ag g
uaauc      -aa    u           a     u   acc  g
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr21: 67586358-67586448 [+]
intergenic
Clustered miRNAs
< 10kb from bta-mir-544a
bta-mir-376e chr21: 67577941-67578022 [+]
bta-mir-376c chr21: 67578312-67578397 [+]
bta-mir-376d chr21: 67578686-67578767 [+]
bta-mir-654 chr21: 67578839-67578919 [+]
bta-mir-376b chr21: 67579062-67579154 [+]
bta-mir-376a chr21: 67579421-67579519 [+]
bta-mir-1185 chr21: 67581370-67581455 [+]
bta-mir-3956 chr21: 67582109-67582206 [+]
bta-mir-381 chr21: 67583073-67583147 [+]
bta-mir-487b chr21: 67583558-67583641 [+]
bta-mir-539 chr21: 67584372-67584449 [+]
bta-mir-544a chr21: 67586358-67586448 [+]
bta-mir-655 chr21: 67587315-67587411 [+]
bta-mir-411c chr21: 67589478-67589551 [+]
bta-mir-487a chr21: 67589864-67589943 [+]
bta-mir-3578 chr21: 67592873-67592958 [-]
bta-mir-382 chr21: 67592878-67592953 [+]
bta-mir-134 chr21: 67593257-67593329 [+]
bta-mir-485 chr21: 67593955-67594027 [+]
bta-mir-453 chr21: 67594686-67594765 [+]
Database links

Mature sequence bta-miR-544a

Accession MIMAT0009346
Sequence

55 -  

auucugcauuuuuagcaaguuc

 - 76

Get sequence
Evidence by similarity; MI0003515

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).