Stem-loop sequence bta-mir-302a

AccessionMI0009791 (change log)
DescriptionBos taurus miR-302a stem-loop
Gene family MIPF0000071; mir-302
Literature search

5 open access papers mention bta-mir-302a
(11 sentences)

Stem-loop
   c   c    u         u           aua 
5'  cca cacu aaacgugga guacuugcuuu   g
    ||| |||| ||||||||| |||||||||||   c
3'  ggu guga uuuguaccu cgugaaugaaa   u
   -   a    u         u           aaa 
Get sequence
Deep sequencing
5 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr6: 14305767-14305836 [+]
antisense
ENSBTAT00000012693 ; LARP7-201; intron 8
Clustered miRNAs
< 10kb from bta-mir-302a
bta-mir-302bchr6: 14305231-14305305 [+]
bta-mir-302cchr6: 14305374-14305441 [+]
bta-mir-302achr6: 14305767-14305836 [+]
bta-mir-302dchr6: 14305944-14306013 [+]
bta-mir-367chr6: 14306070-14306137 [+]
Database links

Mature sequence bta-miR-302a

Accession MIMAT0009278
Sequence

46 - 

aagugcuuccauguuuuaguga

 - 67

Get sequence
Deep sequencing5 reads, 5 experiments
Evidence by similarity; MI0010350
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).