Stem-loop sequence bta-mir-299

Accession MI0009787
Description Bos taurus miR-299 stem-loop
Gene family MIPF0000186; mir-299
Stem-loop 
     a                      uc 
aagaa ugguuuaccgucccacauacau  u
||||| ||||||||||||||||||||||  g
uucuu gccaaauggcaggguguaugua  a
     c                      ua
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr21: 67563570-67563632 [+]
sense
Clustered miRNAs
< 10kb from bta-mir-299
bta-mir-379 chr21: 67561869-67561954 [+]
bta-mir-411a chr21: 67563098-67563179 [+]
bta-mir-299 chr21: 67563570-67563632 [+]
bta-mir-380 chr21: 67564803-67564863 [+]
bta-mir-411b chr21: 67564957-67565031 [+]
bta-mir-1197 chr21: 67565299-67565395 [+]
bta-mir-323 chr21: 67565468-67565553 [+]
bta-mir-758 chr21: 67565766-67565853 [+]
bta-mir-329b chr21: 67566507-67566589 [+]
bta-mir-329a chr21: 67566817-67566899 [+]
bta-mir-494 chr21: 67569676-67569760 [+]
bta-mir-1193 chr21: 67570008-67570112 [+]
bta-mir-543 chr21: 67571825-67571904 [+]
bta-mir-495 chr21: 67573235-67573315 [+]
Database links
  • ENTREZGENE: 100313024;MIR299

Mature sequence bta-miR-299

Accession MIMAT0009274
Sequence

7 -  

ugguuuaccgucccacauacau

 - 28

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Evidence experimental; cloned [3]

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).
3
PMID:19758457 "Characterization of bovine miRNAs by sequencing and bioinformatics analysis" Jin W, Grant JR, Stothard P, Moore SS, Guan LL BMC Mol Biol. 10:90(2009).