Stem-loop sequence bta-mir-183

Accession MI0009756
Description Bos taurus miR-183 stem-loop
Gene family MIPF0000066; mir-183
Stem-loop 
    g      --ac     ga        --   ac 
cugu uauggc    uggua  auucacug  uga  a
|||| ||||||    |||||  ||||||||  |||   
gaca auaccg    gccau  uaagugac  gcu  g
    a      ggaa     --        ug   cu
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Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr4: 94411431-94411500 [-]
sense
ENSBTAT00000019327 ; Q9GLW2_BOVIN; intron 4
Clustered miRNAs
< 10kb from bta-mir-183
bta-mir-183 chr4: 94411431-94411500 [-]
bta-mir-96 chr4: 94411193-94411295 [-]
bta-mir-182 chr4: 94406700-94406810 [-]
Database links
  • ENTREZGENE: 100313256;MIR183

Mature sequence bta-miR-183

Accession MIMAT0009245
Sequence

6 -  

uauggcacugguagaauucacug

 - 28

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Evidence by similarity; MI0000928

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).
2
PMID:18945293 "Annotation of 390 bovine miRNA genes by sequence similarity with other species" Strozzi F, Mazza R, Malinverni R, Williams JL Anim Genet. 40:125(2009).