Stem-loop sequence dya-mir-100

Accession MI0009633
Description Drosophila yakuba miR-100 stem-loop
Gene family MIPF0000025; mir-99
Stem-loop 
-c    a     aa       au   aa      - u uuu 
  cauu acaga  cccguaa  ccg  cuugug c g   u
  |||| |||||  |||||||  |||  |||||| | |    
  guaa ugucu  ggguauu  ggc  gaacau g c   a
ac    c     ga       ac   ca      u u uau
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Genome context
Coordinates (dyak_r1.3_FB2010_02) Overlapping transcripts
2R: 4988220-4988301 [+]
intergenic
Clustered miRNAs
< 10kb from dya-mir-100
dya-mir-100 2R: 4988220-4988301 [+]
dya-let-7 2R: 4988834-4988911 [+]
dya-mir-125 2R: 4989114-4989223 [+]

Mature sequence dya-miR-100

Accession MIMAT0009059
Sequence

12 -  

aacccguaaauccgaacuugug

 - 33

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Evidence by similarity; MI0000378

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).