Stem-loop sequence dvi-mir-286

Accession MI0009517
Description Drosophila virilis miR-286 stem-loop
Gene family MIPF0000225; mir-286
Stem-loop 
--         aaug    u   -    a          uucaaaca     cca 
  uuaaaauua    gcga ugu cggu uggucgcuuu        auaua   u
  |||||||||    |||| ||| |||| ||||||||||        |||||    
  aauuuuaau    ugcu aca gcca aucagugaaa        uauau   u
aa         aucg    c   a    g          --------     cua
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Genome context
Coordinates (FB2011_07) Overlapping transcripts
scaffold_12875: 4112127-4112227 [+]
intergenic
Clustered miRNAs
< 10kb from dvi-mir-286
dvi-mir-309 scaffold_12875: 4111809-4111882 [+]
dvi-mir-3 scaffold_12875: 4111962-4112026 [+]
dvi-mir-286 scaffold_12875: 4112127-4112227 [+]
dvi-mir-4 scaffold_12875: 4112313-4112393 [+]
dvi-mir-5 scaffold_12875: 4112468-4112537 [+]
dvi-mir-6-1 scaffold_12875: 4112632-4112701 [+]
dvi-mir-6-2 scaffold_12875: 4112784-4112863 [+]
dvi-mir-6-3 scaffold_12875: 4112960-4113032 [+]

Mature sequence dvi-miR-286

Accession MIMAT0008950
Sequence

67 -  

ugacuagaccgaacacucgugcu

 - 89

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Evidence by similarity; MI0000380

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).