Stem-loop sequence dvi-mir-281-2

AccessionMI0009493 (change log)
DescriptionDrosophila virilis miR-281-2 stem-loop
Gene family MIPF0000087; mir-46
Stem-loop
         gcg a ug        -ua     c      ----   g  a 
5' cgaaua   a a  aagagagc   uccgu gacagu    caa cu u
   ||||||   | |  ||||||||   ||||| ||||||    ||| ||  
3' gcuuau   u u  uucucucg   aggua cuguca    guu ga a
         -aa a gu        uua     -      uaau   a  c 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (DroVir3) Overlapping transcripts
scaffold_12875: 19830112-19830202 [+]
intergenic
Clustered miRNAs
< 10kb from dvi-mir-281-2
dvi-mir-281-1scaffold_12875: 19829928-19830015 [+]
dvi-mir-281-2scaffold_12875: 19830112-19830202 [+]
Database links

Mature sequence dvi-miR-281-2-5p

Accession MIMAT0009188
Previous IDsdvi-miR-281-2*
Sequence

15 - 

aagagagcuauccgucgacagu

 - 36

Get sequence
Evidence experimental; Illumina [2]

Mature sequence dvi-miR-281-3p

Accession MIMAT0008927
Previous IDsdvi-miR-281
Sequence

59 - 

ugucauggaauugcucucuuugu

 - 81

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).
2
PMID:24448446 "Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis" Ninova M, Ronshaugen M, Griffiths-Jones S RNA. 20:360-372(2014).