Stem-loop sequence dsi-mir-309

AccessionMI0009461 (change log)
DescriptionDrosophila simulans miR-309 stem-loop
Gene family MIPF0000140; mir-3
Stem-loop
         c       c   uu    u   c aau 
5' auuaua gacaaac uug  cggu uug c   u
   |||||| ||||||| |||  |||| ||| |   u
3' uaauau cuguuug aau  guca gac g   c
         c       a   gg    c   c aac 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dsim_caf1; GCA_000259055.1) Overlapping transcripts
chr2R: 14254644-14254712 [-]
intergenic
Clustered miRNAs
< 10kb from dsi-mir-309
dsi-mir-309chr2R: 14254644-14254712 [-]
dsi-mir-3chr2R: 14254533-14254601 [-]
dsi-mir-286chr2R: 14254362-14254461 [-]
dsi-mir-4chr2R: 14254228-14254308 [-]
dsi-mir-5chr2R: 14254101-14254163 [-]
dsi-mir-6-1chr2R: 14253951-14254021 [-]
dsi-mir-6-2chr2R: 14253809-14253882 [-]
dsi-mir-6-3chr2R: 14253656-14253735 [-]
Database links

Mature sequence dsi-miR-309

Accession MIMAT0008894
Sequence

44 - 

gcacuggguaaaguuuguccua

 - 65

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Evidence by similarity; MI0000421

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).