Stem-loop sequence dsi-mir-5

AccessionMI0009457 (change log)
DescriptionDrosophila simulans miR-5 stem-loop
Gene family MIPF0000309; mir-5
Stem-loop
   --ua       c              ga    u 
5'     aaaggaa gaucguugugauau  guug u
       ||||||| ||||||||||||||  ||||  
3'     uuuccuu uuagugacacuaua  caac c
   uaua       -              --    c 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dsim_caf1; GCA_000259055.1) Overlapping transcripts
chr2R: 14254101-14254163 [-]
intergenic
Clustered miRNAs
< 10kb from dsi-mir-5
dsi-mir-309chr2R: 14254644-14254712 [-]
dsi-mir-3chr2R: 14254533-14254601 [-]
dsi-mir-286chr2R: 14254362-14254461 [-]
dsi-mir-4chr2R: 14254228-14254308 [-]
dsi-mir-5chr2R: 14254101-14254163 [-]
dsi-mir-6-1chr2R: 14253951-14254021 [-]
dsi-mir-6-2chr2R: 14253809-14253882 [-]
dsi-mir-6-3chr2R: 14253656-14253735 [-]
Database links

Mature sequence dsi-miR-5

Accession MIMAT0008890
Sequence

3 - 

aaaggaacgaucguugugauaug

 - 25

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Evidence by similarity; MI0000123

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).