Stem-loop sequence dse-mir-133

AccessionMI0009396 (change log)
DescriptionDrosophila sechellia miR-133 stem-loop
Gene family MIPF0000029; mir-133
Stem-loop
   cu     -    ug             cauc  gu     -  guu 
5'   gcaac gcug  uguagcugguuga    gg  cagau cu   u
     ||||| ||||  |||||||||||||    ||  ||||| ||    
3'   cguug ugac  augucgaccaacu    cc  guuua ga   u
   gu     g    cg             -ucc  ug     c  auu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dsec_r1.3_FB2010_02) Overlapping transcripts
scaffold_18: 496883-496973 [+]
intergenic
Clustered miRNAs
< 10kb from dse-mir-133
dse-mir-133scaffold_18: 496883-496973 [+]
dse-mir-288scaffold_18: 498552-498648 [-]
Database links

Mature sequence dse-miR-133

Accession MIMAT0008834
Sequence

55 - 

uugguccccuucaaccagcugu

 - 76

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Evidence by similarity; MI0000362

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).