Stem-loop sequence dse-mir-281-1

AccessionMI0009365 (change log)
DescriptionDrosophila sechellia miR-281-1 stem-loop
Gene family MIPF0000087; mir-46
Stem-loop
         ag  a           -ug     c      ccagaaac 
5' cgaaua  ug auaaagagagc   uccgu gacagu        c
   ||||||  || |||||||||||   ||||| ||||||        a
3' gcuuau  au uguuucucucg   aggua cuguca        u
         -a  a           uua     -      cuauaauu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dsec_r1.3_FB2010_02) Overlapping transcripts
scaffold_1: 5602980-5603069 [-]
intergenic
Clustered miRNAs
< 10kb from dse-mir-281-1
dse-mir-281-1scaffold_1: 5602980-5603069 [-]
dse-mir-281-2scaffold_1: 5602761-5602852 [-]
Database links

Mature sequence dse-miR-281-1-5p

Accession MIMAT0008782
Previous IDsdse-miR-281-1*
Sequence

15 - 

aagagagcuguccgucgacagu

 - 36

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Evidence by similarity; MI0000366

Mature sequence dse-miR-281-3p

Accession MIMAT0008783
Previous IDsdse-miR-281
Sequence

58 - 

ugucauggaauugcucucuuugu

 - 80

Get sequence
Evidence by similarity; MI0000366

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).