Stem-loop sequence dse-mir-79

AccessionMI0009331 (change log)
DescriptionDrosophila sechellia miR-79 stem-loop
Gene family MIPF0000014; mir-9
Stem-loop
   ag   -  uu    u        cgc       g     --   au 
5'   cug ac  gcca ugcuuugg   uuuagcu uauga  uag  u
     ||| ||  |||| ||||||||   ||||||| |||||  |||  u
3'   gac ug  cggu acgaaacc   agaucga auacu  auc  a
   ua   g  uu    u        auu       a     uc   aa 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dsec_r1.3_FB2010_02) Overlapping transcripts
scaffold_7: 345568-345659 [+]
intergenic
Clustered miRNAs
< 10kb from dse-mir-79
dse-mir-9cscaffold_7: 344907-344998 [+]
dse-mir-306scaffold_7: 345422-345505 [+]
dse-mir-79scaffold_7: 345568-345659 [+]
dse-mir-9bscaffold_7: 345756-345844 [+]
Database links

Mature sequence dse-miR-79

Accession MIMAT0008769
Sequence

57 - 

uaaagcuagauuaccaaagcau

 - 78

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Evidence by similarity; MI0000374

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).