Stem-loop sequence dse-mir-6-1

AccessionMI0009327 (change log)
DescriptionDrosophila sechellia miR-6-1 stem-loop
Gene family MIPF0000119; mir-6
Stem-loop
   ag             ug     c    ag uaau 
5'   uagagggaauagu  cugug ugua  u    a
     |||||||||||||  ||||| ||||  |    u
3'   guuuuucuugucg  gacac auau  a    a
   au             gu     u    cu uacc 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dsec_r1.3_FB2010_02) Overlapping transcripts
scaffold_1: 13063246-13063316 [-]
intergenic
Clustered miRNAs
< 10kb from dse-mir-6-1
dse-mir-309scaffold_1: 13063938-13064006 [-]
dse-mir-3scaffold_1: 13063827-13063895 [-]
dse-mir-286scaffold_1: 13063657-13063755 [-]
dse-mir-4scaffold_1: 13063523-13063603 [-]
dse-mir-5scaffold_1: 13063395-13063458 [-]
dse-mir-6-1scaffold_1: 13063246-13063316 [-]
dse-mir-6-2scaffold_1: 13063107-13063180 [-]
dse-mir-6-3scaffold_1: 13062954-13063033 [-]
Database links

Mature sequence dse-miR-6

Accession MIMAT0008765
Sequence

47 - 

uaucacaguggcuguucuuuuu

 - 68

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Evidence by similarity; MI0000126

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).