Stem-loop sequence dpe-mir-4

AccessionMI0009308 (change log)
DescriptionDrosophila persimilis miR-4 stem-loop
Gene family MIPF0000305; mir-4
Stem-loop
    ug    u gu   uu    c   c   cuuag      u 
5' u  caau a  uuc  uggu guc agc     gugauu c
   |  |||| |  |||  |||| ||| |||     |||||| u
3' g  guug u  aag  acca cag ucg     uacuag c
    gu    c ug   uu    a   a   --aaa      u 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dper_r1.3_FB2010_02) Overlapping transcripts
scaffold_2: 8906168-8906248 [+]
intergenic
Clustered miRNAs
< 10kb from dpe-mir-4
dpe-mir-309scaffold_2: 8905710-8905777 [+]
dpe-mir-3scaffold_2: 8905839-8905911 [+]
dpe-mir-286scaffold_2: 8905981-8906076 [+]
dpe-mir-4scaffold_2: 8906168-8906248 [+]
dpe-mir-5scaffold_2: 8906361-8906432 [+]
dpe-mir-6-1scaffold_2: 8906500-8906568 [+]
dpe-mir-6-3scaffold_2: 8906643-8906725 [+]
dpe-mir-6-2scaffold_2: 8906789-8906868 [+]
Database links

Mature sequence dpe-miR-4

Accession MIMAT0008751
Sequence

49 - 

auaaagcuagacaaccauuga

 - 69

Get sequence
Evidence by similarity; MI0000122

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).