Stem-loop sequence dpe-mir-2b

AccessionMI0009293 (change log)
DescriptionDrosophila persimilis miR-2b stem-loop
Gene family MIPF0000049; mir-2
Stem-loop
          a          -         a   --uuu  cuu 
5' uuguguc uucuucaaag ugguuguga aug     gc   u
   ||||||| |||||||||| ||||||||| |||     ||    
3' agcacag gaggaguuuc accgacacu uac     cg   u
          c          g         a   uuauc  uau 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dper_r1.3_FB2010_02) Overlapping transcripts
scaffold_5: 5559686-5559768 [+]
intergenic
Clustered miRNAs
< 10kb from dpe-mir-2b
dpe-mir-2bscaffold_5: 5559686-5559768 [+]
dpe-mir-2a-1scaffold_5: 5559986-5560059 [+]
dpe-mir-2a-2scaffold_5: 5560580-5560651 [+]
Database links

Mature sequence dpe-miR-2b

Accession MIMAT0008738
Sequence

54 - 

uaucacagccagcuuugaggagc

 - 76

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Evidence by similarity; MI0000120

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).