Stem-loop sequence dgr-mir-281-1

AccessionMI0009128 (change log)
DescriptionDrosophila grimshawi miR-281-1 stem-loop
Gene family MIPF0000087; mir-46
Stem-loop
         aguga           -ug     c      ccag  ua 
5' cgaaua     auaaagagagc   uccgu gacagu    ua  a
   ||||||     |||||||||||   ||||| ||||||    ||  a
3' gcuuau     uguuucucucg   aggua cuguca    au  u
         -agua           uua     -      --ua  uu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dgri_r1.3_FB2010_02) Overlapping transcripts
scaffold_15245: 18178200-18178287 [+]
intergenic
Clustered miRNAs
< 10kb from dgr-mir-281-1
dgr-mir-281-1scaffold_15245: 18178200-18178287 [+]
dgr-mir-281-2scaffold_15245: 18178390-18178482 [+]
Database links

Mature sequence dgr-miR-281-1-5p

Accession MIMAT0008587
Previous IDsdgr-miR-281-1*
Sequence

15 - 

aagagagcuguccgucgacagu

 - 36

Get sequence
Evidence by similarity; MI0000366

Mature sequence dgr-miR-281-3p

Accession MIMAT0008588
Previous IDsdgr-miR-281
Sequence

56 - 

ugucauggaauugcucucuuugu

 - 78

Get sequence
Evidence by similarity; MI0000370

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).