Stem-loop sequence dan-mir-125

Accession MI0009011
Description Drosophila ananassae miR-125 stem-loop
Gene family MIPF0000017; mir-125
Stem-loop 
     gu    au      augg ug  uc  u    c cu         cu  ua 
gacau  gcaa  guuugu    c  au  cc gaga c  aacuuguga  uu  a
|||||  ||||  ||||||    |  ||  || |||| |  |||||||||  ||  u
uugua  cguu  caaacg    g  ua  gg cucu g  uugaacacu  ga  a
     gu    --      --ca gu  -u  c    a uu         uu  cc
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Genome context
Coordinates (dana_r1.3_FB2010_03) Overlapping transcripts
scaffold_12916: 2379476-2379585 [+]
intergenic
Clustered miRNAs
< 10kb from dan-mir-125
dan-mir-100 scaffold_12916: 2378771-2378852 [+]
dan-let-7 scaffold_12916: 2379181-2379258 [+]
dan-mir-125 scaffold_12916: 2379476-2379585 [+]

Mature sequence dan-miR-125

Accession MIMAT0008473
Sequence

29 -  

ucccugagacccuaacuuguga

 - 50

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Evidence by similarity; MI0000417

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).