Stem-loop sequence dan-mir-13b-1

AccessionMI0008963 (change log)
DescriptionDrosophila ananassae miR-13b-1 stem-loop
Gene family MIPF0000049; mir-2
Stem-loop
      -ug         -    u    ccu    u   u 
5' cca   ucguuaaaa ggcu guga   uaug auu c
   |||   ||||||||| |||| ||||   |||| |||  
3' ggu   agcaguuuu ccga cacu   auac uaa g
      uug         a    -    ---    -   c 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dana_r1.3_FB2010_03) Overlapping transcripts
scaffold_13340: 12827484-12827552 [-]
intergenic
Clustered miRNAs
< 10kb from dan-mir-13b-1
dan-mir-2cscaffold_13340: 12827838-12827928 [-]
dan-mir-13ascaffold_13340: 12827627-12827700 [-]
dan-mir-13b-1scaffold_13340: 12827484-12827552 [-]
Database links

Mature sequence dan-miR-13b

Accession MIMAT0008426
Sequence

44 - 

uaucacagccauuuugacgagu

 - 65

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Evidence by similarity; MI0000135

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).