Stem-loop sequence tca-mir-929

Accession MI0008934
Description Tribolium castaneum miR-929 stem-loop
Gene family MIPF0000447; mir-929
Stem-loop 
-   cgg  au     uc        a        ag         c    c 
 aga   cc  cuuaa  ggggucaa uugacucu  uagggaguc guua u
 |||   ||  |||||  |||||||| ||||||||  ||||||||| |||| u
 ucu   gg  gaguu  ccucaguu gacugagg  aucccucag cgau u
a   aaa  --     uc        g        ca         -    a
Get sequence
Deep sequencing
76 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG9: 12108517-12108619 [-]
intergenic
Database links
  • ENTREZGENE: 100314360;Mir929

Mature sequence tca-miR-929-5p

Accession MIMAT0008395
Previous IDs tca-miR-929
Sequence

25 -  

aauugacucuaguagggaguc

 - 45

Get sequence
Deep sequencing 40 reads, 2 experiments
Evidence experimental; SOLID [2]

Mature sequence tca-miR-929-3p

Accession MIMAT0019133
Sequence

62 -  

cucccuaacggagucagguug

 - 82

Get sequence
Deep sequencing 36 reads, 2 experiments
Evidence experimental; SOLID [2]

References

1
PMID:18571123 "Genome-wide mapping of conserved microRNAs and their host transcripts in Tribolium castaneum" Luo Q, Zhou Q, Yu X, Lin H, Hu S, Yu J J Genet Genomics. 35:349-355(2008).
2
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).