Stem-loop sequence tca-mir-31

Accession MI0008904
Previous IDs tca-mir-31a
Description Tribolium castaneum miR-31 stem-loop
Gene family MIPF0000064; mir-31
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled Mir-31. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

miR-31 has been characterised as a tumour suppressor miRNA, with its levels varying in breast cancer cells according to the metastatic state of the tumour. From its typical abundance in healthy tissue is a moderate decrease in non-metastatic breast cancer cell lines, and levels are almost completely absent in mouse and human metastatic breast cancer cell lines. There has also been observed a strong encapsulation of tumour cells expressing miR-31, as well as a reduced cell survival rate. miR-31's antimetastatic effects therefore make it a potential therapeutic target for breast cancer.

Show Wikipedia entry View @ Wikipedia Edit Wikipedia entry
Stem-loop
     -a   ca   aa    uc          aaggu 
gaggc  gag  ggc  gaug  ggcauagcug     g
|||||  |||  |||  ||||  ||||||||||     u
uuccg  uuc  ccg  cuac  cuguaucggc     u
     aa   aa   gc    -u          aaagu 
Get sequence
Deep sequencing
28356 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG7: 7967712-7967788 [+]
intergenic
Database links

Mature sequence tca-miR-31-5p

Accession MIMAT0008362
Previous IDs tca-miR-31a
Sequence

11 - 

aggcaagaugucggcauagcu

 - 31

Get sequence
Deep sequencing 28110 reads, 2 experiments
Evidence experimental; SOLID [2]

Mature sequence tca-miR-31-3p

Accession MIMAT0019106
Sequence

47 - 

ggcuaugucucauccggccaac

 - 68

Get sequence
Deep sequencing 244 reads, 2 experiments
Evidence experimental; SOLID [2]

References

1
2
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).