Stem-loop sequence ptr-mir-653

Accession MI0008840
Description Pan troglodytes miR-653 stem-loop
Gene family MIPF0000435; mir-653
Stem-loop 
----------u      cuu              u     c     cagcu 
           ucauuc   caguguugaaacaa cucua ugaac     u
           ||||||   |||||||||||||| ||||| |||||     c
           aguaag   guuauaacuuuguu gaggu acuug     a
gaagguagaau      aac              u     c     aacaa
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
7: 94019107-94019201 [-]
sense
Clustered miRNAs
< 10kb from ptr-mir-653
ptr-mir-489 7: 94020205-94020287 [-]
ptr-mir-653 7: 94019107-94019201 [-]
Database links
  • ENTREZGENE: 100316259;MIR653

Mature sequence ptr-miR-653

Accession MIMAT0008303
Sequence

13 -  

guguugaaacaaucucuacug

 - 33

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Evidence by similarity; MI0003674

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).