Stem-loop sequence ptr-mir-526a-1

Accession MI0008737
Description Pan troglodytes miR-526a-1 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
-     cu    c               a      g  g  u 
 ucagg  guga ccucuagagggaagc cuuucu uu cu g
 |||||  |||| ||||||||||||||| |||||| || ||  
 aguuu  cauu ggagauuuuccuucg gaaaga aa ga a
g     cu    a               c      g  -  a
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
19: 58614407-58614490 [+]
sense
Clustered miRNAs
< 10kb from ptr-mir-526a-1
ptr-mir-525 19: 58605693-58605776 [+]
ptr-mir-523 19: 58606558-58606636 [+]
ptr-mir-518f 19: 58608165-58608250 [+]
ptr-mir-520b 19: 58609377-58609436 [+]
ptr-mir-518b 19: 58610892-58610973 [+]
ptr-mir-526a-1 19: 58614407-58614490 [+]
ptr-mir-520c 19: 58615610-58615695 [+]
ptr-mir-518c 19: 58616894-58616993 [+]
ptr-mir-524 19: 58617963-58618048 [+]
ptr-mir-517a 19: 58619225-58619310 [+]
ptr-mir-519d 19: 58621051-58621137 [+]
ptr-mir-521-2 19: 58624281-58624366 [+]
Database links

Mature sequence ptr-miR-526a

Accession MIMAT0008210
Sequence

14 -  

cucuagagggaagcacuuucug

 - 35

Get sequence
Evidence by similarity; MI0003157

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).