Stem-loop sequence ptr-mir-526a-1

AccessionMI0008737 (change log)
DescriptionPan troglodytes miR-526a-1 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop
   -     cu    c               a      g  g  u 
5'  ucagg  guga ccucuagagggaagc cuuucu uu cu g
    |||||  |||| ||||||||||||||| |||||| || ||  
3'  aguuu  cauu ggagauuuuccuucg gaaaga aa ga a
   g     cu    a               c      g  -  a 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chr19: 56054378-56054461 [+]
sense
ENSPTRT00000054477 ; ptr-mir-526a-1-201; exon 1
Clustered miRNAs
< 10kb from ptr-mir-526a-1
ptr-mir-525chr19: 56045667-56045750 [+]
ptr-mir-523chr19: 56046532-56046610 [+]
ptr-mir-518fchr19: 56048137-56048222 [+]
ptr-mir-520bchr19: 56049349-56049408 [+]
ptr-mir-518bchr19: 56050864-56050945 [+]
ptr-mir-526a-1chr19: 56054378-56054461 [+]
ptr-mir-520cchr19: 56055581-56055666 [+]
ptr-mir-518cchr19: 56056864-56056963 [+]
ptr-mir-524chr19: 56057933-56058018 [+]
ptr-mir-517achr19: 56059195-56059280 [+]
ptr-mir-519dchr19: 56060274-56060360 [+]
ptr-mir-521-2chr19: 56063505-56063590 [+]
Database links

Mature sequence ptr-miR-526a

Accession MIMAT0008210
Sequence

14 - 

cucuagagggaagcacuuucug

 - 35

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Evidence by similarity; MI0003151
Predicted targets

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).