Stem-loop sequence ptr-mir-524

Accession MI0008735
Description Pan troglodytes miR-524 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
-    u        c  a           a      cuug     
 cuca gcugugac cu caaagggaagc cuuucu    ucca 
 |||| |||||||| || ||||||||||| ||||||    ||| a
 gagu uggcauug ga guuucccuucg ggaaga    agga 
a    u        u  g           c      --aa
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
19: 58617963-58618048 [+]
sense
Clustered miRNAs
< 10kb from ptr-mir-524
ptr-mir-518f 19: 58608165-58608250 [+]
ptr-mir-520b 19: 58609377-58609436 [+]
ptr-mir-518b 19: 58610892-58610973 [+]
ptr-mir-526a-1 19: 58614407-58614490 [+]
ptr-mir-520c 19: 58615610-58615695 [+]
ptr-mir-518c 19: 58616894-58616993 [+]
ptr-mir-524 19: 58617963-58618048 [+]
ptr-mir-517a 19: 58619225-58619310 [+]
ptr-mir-519d 19: 58621051-58621137 [+]
ptr-mir-521-2 19: 58624281-58624366 [+]
ptr-mir-520d 19: 58627842-58627927 [+]
Database links
  • ENTREZGENE: 100316390;MIR524

Mature sequence ptr-miR-524

Accession MIMAT0008208
Sequence

52 -  

gaaggcgcuucccuuuggagu

 - 72

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Evidence by similarity; MI0003160

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).