Stem-loop sequence ptr-mir-521-2

Accession MI0008732
Description Pan troglodytes miR-521-2 stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
-    g  u     u   c         ---aa    c    gu 
 cuca gc gugac cuc aaagggaag     uuuu ucuu  c
 |||| || ||||| ||| |||||||||     |||| ||||   
 gagu ug cauug gag uuucccuuc     agaa agaa  u
a    g  c     u   a         acgca    a    aa
Get sequence
Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
19: 58624281-58624366 [+]
intergenic
Clustered miRNAs
< 10kb from ptr-mir-521-2
ptr-mir-526a-1 19: 58614407-58614490 [+]
ptr-mir-520c 19: 58615610-58615695 [+]
ptr-mir-518c 19: 58616894-58616993 [+]
ptr-mir-524 19: 58617963-58618048 [+]
ptr-mir-517a 19: 58619225-58619310 [+]
ptr-mir-519d 19: 58621051-58621137 [+]
ptr-mir-521-2 19: 58624281-58624366 [+]
ptr-mir-520d 19: 58627842-58627927 [+]
ptr-mir-517b-1 19: 58628806-58628872 [+]
ptr-mir-520g 19: 58629897-58629985 [+]
ptr-mir-516b-2 19: 58633174-58633262 [+]
Database links

Mature sequence ptr-miR-521

Accession MIMAT0008205
Sequence

53 -  

aacgcacuucccuuuagagugu

 - 74

Get sequence
Evidence by similarity; MI0003176

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).