Stem-loop sequence ptr-mir-520g

Accession MI0008729
Description Pan troglodytes miR-520g stem-loop
Gene family MIPF0000020; mir-515
Stem-loop 
-    ugcu     c         -ac      uc     guugu 
 ccca    gugac cucuagagg   gcacuu  uguuu     c
 ||||    ||||| |||||||||   ||||||  |||||     u
 gggu    cauug gagauuucc   cgugaa  acaaa     g
a    uuac     u         cuu      --     aaaga
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
19: 58629897-58629985 [+]
intergenic
Clustered miRNAs
< 10kb from ptr-mir-520g
ptr-mir-519d 19: 58621051-58621137 [+]
ptr-mir-521-2 19: 58624281-58624366 [+]
ptr-mir-520d 19: 58627842-58627927 [+]
ptr-mir-517b-1 19: 58628806-58628872 [+]
ptr-mir-520g 19: 58629897-58629985 [+]
ptr-mir-516b-2 19: 58633174-58633262 [+]
ptr-mir-526a-2 19: 58634675-58634742 [+]
ptr-mir-518e 19: 58638023-58638109 [+]
Database links

Mature sequence ptr-miR-520g

Accession MIMAT0008203
Sequence

54 -  

acaaagugcuucccuuuagagugu

 - 77

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Evidence by similarity; MI0003166

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).