Stem-loop sequence ptr-mir-448

Accession MI0008669
Description Pan troglodytes miR-448 stem-loop
Gene family MIPF0000149; mir-448
Stem-loop 
------------cc       u a            g   u     ga au    auu  au 
              gggaggu g acauccugcaua ugc gccag  a  cccu   uc  a
              ||||||| | |||||||||||| ||| |||||  |  ||||   ||   
              cccucua c uguaggauguau acg ugguc  u  gggg   ag  u
acugcuucacccga       c c            -   u     gg cg    ---  aa
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Genome context
Coordinates (PanTro2.1.4) Overlapping transcripts
X: 115419875-115419984 [+]
sense
ENSPTRT00000041367 ; B3VRE2_PANTR; intron 4
ENSPTRT00000041367 ; B3VRE2_PANTR; intron 4
ENSPTRT00000041367 ; B3VRE2_PANTR; intron 4
Database links
  • ENTREZGENE: 100316168;MIR448

Mature sequence ptr-miR-448

Accession MIMAT0008148
Sequence

70 -  

uugcauauguaggaugucccau

 - 91

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Evidence by similarity; MI0001637

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).