Stem-loop sequence MI0008606

Accession MI0008606
ID ptr-mir-30e
Description Pan troglodytes miR-30e stem-loop
Stem-loop 
-        uu  ua            uu           g aag u 
 ggcagucu  gc  cuguaaacaucc  gacuggaagcu u   g g
 ||||||||  ||  ||||||||||||  ||||||||||| |   |  
 ccgucgga  cg  gacauuuguagg  cugacuuucga g   c u
a        --  gc            --           g aga u
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Genome context
Coordinates (PanTro2.1) Overlapping transcripts
1: 41417217-41417307 [+]
sense
ENSPTRT00000059336 ; XM_513359.2; intron 5
Clustered miRNAs
< 10kb from ptr-mir-30e
ptr-mir-30e 1: 41417217-41417307 [+]
ptr-mir-30c-1 1: 41420145-41420232 [+]
Database links
  • ENTREZGENE: 100316135;MIR30E
Gene family

MIPF0000005; mir-30

Mature sequence MIMAT0008092

Accession MIMAT0008092
ID ptr-miR-30e
Sequence

16 -  

uguaaacauccuugacuggaag

 - 37

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Evidence by similarity; MI0000749
Predicted targets

References

1
"Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).