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Stem-loop sequence MI0008605

Accession MI0008605
ID ptr-mir-30c-1
Description Pan troglodytes miR-30c-1 stem-loop
Stem-loop 
-     cu    ugu u       u   aca         ---g  a 
 ccaug  guag   g guaaaca ccu   cucucagcu    ug g
 |||||  ||||   | ||||||| |||   |||||||||    ||  
 gguac  cguc   c cauuugu ggg   gagggucgg    ac c
a     --    uuc u       u   --a         ugga  u
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Genome context
Coordinates (PanTro2.1) Overlapping transcripts
1: 41420145-41420232 [+]
sense
ENSPTRT00000059336 ; XM_513359.2; intron 5
Clustered miRNAs
< 10kb from ptr-mir-30c-1
ptr-mir-30e 1: 41417217-41417307 [+]
ptr-mir-30c-1 1: 41420145-41420232 [+]
Gene family

MIPF0000005; mir-30

Mature sequence MIMAT0002614

Accession MIMAT0002614
ID ptr-miR-30c
Sequence

16 -  

uguaaacauccuacacucucagc

 - 38

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Evidence by similarity; MI0000736
Predicted targets

References

1
"Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).