Stem-loop sequence ptr-mir-20b

AccessionMI0008579 (change log)
DescriptionPan troglodytes miR-20b stem-loop
Gene family MIPF0000001; mir-17
Stem-loop
   a    -ca           g     -gu    uu 
5'  guac   aagugcucaua ugcag   aguu  g
    ||||   ||||||||||| |||||   ||||  g
3'  caug   uucacggguau auguc   ucag  c
   -    acc           g     auc    ua 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Pan_tro3.0; GCA_000001515.5) Overlapping transcripts
chrX: 134038030-134038097 [-]
sense
ENSPTRT00000054428 ; ptr-mir-20b-201; exon 1
Clustered miRNAs
< 10kb from ptr-mir-20b
ptr-mir-106achrX: 134038418-134038498 [-]
ptr-mir-18bchrX: 134038262-134038331 [-]
ptr-mir-20bchrX: 134038030-134038097 [-]
ptr-mir-19b-2chrX: 134037891-134037987 [-]
ptr-mir-92-2chrX: 134037758-134037832 [-]
Database links

Mature sequence ptr-miR-20b

Accession MIMAT0008069
Sequence

6 - 

caaagugcucauagugcagguag

 - 28

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Evidence by similarity; MI0001519
Predicted targets

References

1
PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).