Stem-loop sequence ptr-mir-151

Accession

MI0008551

Description

Pan troglodytes miR-151 stem-loop

Gene family

MIPF0000057; mir-28

Stem-loop

--------------u      c            ca          u ucu 
               uuccug ccucgaggagcu  cagucuagua g   c
               |||||| ||||||||||||  |||||||||| |    
               agggac ggaguuccucga  gucagaucau c   a
uccacucauacuggu      a            -a          c ccu 

Genome context

• Coordinates (PanTro2.1.4): 8: 139499624-139499712 [-]
• Overlapping transcripts:

  sense

  ENSPTRT00000054366 ; exon 1

  ENSPTRT00000054366 ; exon 1

  ENSPTRT00000054366 ; exon 1

  ENSPTRT00000067822 ; intron 19

  ENSPTRT00000067570 ; intron 21

  ENSPTRT00000038141 ; intron 22

  ENSPTRT00000064690 ; intron 22

  ENSPTRT00000038141 ; intron 22

  ENSPTRT00000038141 ; intron 22

  ENSPTRT00000046347 ; intron 24

  ENSPTRT00000065988 ; intron 25

Database links

• ENTREZGENE: 100316106;MIR151

Mature sequence ptr-miR-151

• Accession: MIMAT0008045
• Sequence: 47 - cuagacugaagcuccuugagg - 67
• Evidence: by similarity; MI0000809

References

1. PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).