Stem-loop sequence ptr-mir-1245

Accession

MI0008451

Description

Pan troglodytes miR-1245 stem-loop

Gene family

MIPF0000620; mir-1245

Stem-loop

--uu      uaa            uc   --u  u 
    uaugua   gccuuuagauca  uga   gu g
    ||||||   ||||||||||||  |||   || a
    auacau   cggaaaucuagu  auu   ca a
aaau      --c            ga   ucu  u 

Genome context

• Coordinates (PanTro2.1.4): 2B: 193624085-193624153 [+]
• Overlapping transcripts:

  sense

  ENSPTRT00000023592 ; intron 1

  ENSPTRT00000023591 ; intron 1

  ENSPTRT00000023592 ; intron 1

  ENSPTRT00000023592 ; intron 1

Database links

• ENTREZGENE: 100316060;MIR1245

Mature sequence ptr-miR-1245

• Accession: MIMAT0007971
• Sequence: 44 - aagugaucuaaaggccuacau - 64
• Evidence: by similarity; MI0006380

References

1. PMID:18760970 "Computational identification of novel microRNA homologs in the chimpanzee genome" Baev V, Daskalova E, Minkov I Comput Biol Chem. 33:62-70(2009).