Stem-loop sequence sly-MIR171d

Accession MI0008368
Description Solanum lycopersicum miR171d stem-loop
Gene family MIPF0000030; MIR171_1
Stem-loop 
     ---------     c          a         c  a  -  -aa      cuu 
augga         agaag gauguuggug gguucaauc ga ga cg   uuuaug   a
|||||         ||||| |||||||||| ||||||||| || || ||   ||||||    
ugccu         ucuuc cuauaaccgc ccgaguuag cu cu gc   aaaugc   u
     uacuuuuau     a          g         a  -  a  aag      uuu
Get sequence
Genome context
Coordinates (SL2.40) Overlapping transcripts
SL2.40ch12: 2882790-2882901 [+]
intergenic

Mature sequence sly-miR171d

Accession MIMAT0007925
Sequence

75 -  

uugagccgcgccaauaucac

 - 94

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:18653800 "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T Genome Res. 18:1602-1609(2008).