Stem-loop sequence sly-MIR169c

Accession MI0008363
Description Solanum lycopersicum miR169c stem-loop
Gene family MIPF0000037; MIR169_2
Stem-loop 
     g      a         g   u             c                    g    ug a  c 
gucua agaguu uuguaugaa agg agggaguggagug agccaaggaugacuugccga augu  u gc u
||||| |||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||  | || a
cagau uuucaa aauguacuu ucc ucucuuauuuuac ucgguuucuacuggacggcu uaca  a cg a
     a      -         a   -             a                    a    gu a  u
Get sequence
Genome context
Coordinates (SL2.40) Overlapping transcripts
SL2.40ch07: 4210774-4210920 [+]
intergenic

Mature sequence sly-miR169c

Accession MIMAT0007920
Sequence

41 -  

cagccaaggaugacuugccga

 - 61

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:18653800 "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" Moxon S, Jing R, Szittya G, Schwach F, Rusholme Pilcher RL, Moulton V, Dalmay T Genome Res. 18:1602-1609(2008).