Stem-loop sequence hsa-mir-1915

Accession

MI0008336

Symbol

HGNC:MIR1915

Description

Homo sapiens miR-1915 stem-loop

Gene family

MIPF0001037; mir-1915

Stem-loop

---ug  a      a       u  c     --     g   a 
     ag ggccgc ccuugcc ug ugccc  gggcc ugc c
     || |||||| ||||||| || |||||  ||||| |||  
     uc ccggcg ggggcgg gc gcggg  cccgg gug c
agcga  -      -       c  a     ac     -   c 

Deep sequencing

13 reads, 6 experiments

Genome context

• Coordinates (GRCh37.p5): chr10: 21785491-21785570 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000047130 ; C10orf114-001; intron 1

  OTTHUMT00000047130 ; C10orf114-001; intron 1

  OTTHUMT00000047130 ; C10orf114-001; intron 1

  ENST00000377113 ; C10orf114-001; intron 1

  ENST00000377113 ; C10orf114-001; intron 1

  ENST00000377113 ; C10orf114-001; intron 1

Database links

• ENTREZGENE: 100302129;MIR1915
• HGNC: 35399;MIR1915

Mature sequence hsa-miR-1915-5p

• Accession: MIMAT0007891
• Previous IDs: hsa-miR-1915*
• Sequence: 12 - accuugccuugcugcccgggcc - 33
• Deep sequencing: 6 reads, 2 experiments
• Evidence: experimental; 454 [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1915-5p
  • MICRORNA.ORG:hsa-miR-1915-5p
  • MIRDB:hsa-miR-1915-5p
  • RNA22-HSA:hsa-miR-1915-5p
  • TARGETMINER:hsa-miR-1915-5p

Mature sequence hsa-miR-1915-3p

• Accession: MIMAT0007892
• Previous IDs: hsa-miR-1915
• Sequence: 47 - ccccagggcgacgcggcggg - 66
• Deep sequencing: 4 reads, 3 experiments
• Evidence: experimental; 454 [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1915-3p
  • MICRORNA.ORG:hsa-miR-1915-3p
  • MIRDB:hsa-miR-1915-3p
  • RNA22-HSA:hsa-miR-1915-3p
  • TARGETMINER:hsa-miR-1915-3p

References

1. PMID:18583537 "MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries" Bar M, Wyman SK, Fritz BR, Qi J, Garg KS, Parkin RK, Kroh EM, Bendoraite A, Mitchell PS, Nelson AM, Ruzzo WL, Ware C, Radich JP, Gentleman R, Ruohola-Baker H, Tewari M Stem Cells. 26:2496-2505(2008).