Stem-loop sequence osa-MIR1861d

Accession MI0008250
Description Oryza sativa miR1861d stem-loop
Gene family MIPF0000567; MIR1861
Stem-loop 
u  c      u     c        a           a  a  u       uc  ucu 
 ug auauuc uaggc uggucuug ggcaggaacug gu gu ggugaac  gc   a
 || |||||| ||||| |||||||| ||||||||||| || || |||||||  ||    
 ac uauaag gucug gccagaac cuguccuuggc ca cg ucacuug  ug   u
a  a      u     a        c           g  g  c       cu  uug
Get sequence
Deep sequencing
528 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr4: 6536337-6536454 [+]
intergenic
Clustered miRNAs
< 10kb from osa-MIR1861d
osa-MIR1861d Chr4: 6536337-6536454 [+]
osa-MIR1861e Chr4: 6536556-6536647 [+]

Mature sequence osa-miR1861d

Accession MIMAT0007799
Sequence

18 -  

uggucuugaggcaggaacugag

 - 39

Get sequence
Deep sequencing 416 reads, 4 experiments
Evidence experimental; 454 [1]

References

1
PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains" Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C Genome Res. 18:1456-1465(2008).