Stem-loop sequence osa-MIR1846a

Accession MI0008242
Description Oryza sativa miR1846a stem-loop
Gene family MIPF0000577; MIR1846
Stem-loop 
-c  c   cuaccaau    c         c  a        gc     c     g 
  cg ucc        gagc gccggaucu cc gugaggag  cgggg cgcug a
  || |||        |||| ||||||||| || ||||||||  ||||| |||||  
  gc agg        cucg cggccuagg gg cgcuccuc  gcccc guggc u
ga  a   aaagagac    -         c  c        uu     a     c
Get sequence
Deep sequencing
74 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr10: 529274-529385 [+]
intergenic

Mature sequence osa-miR1846a-5p

Accession MIMAT0007788
Sequence

33 -  

agugaggaggccggggccgcu

 - 53

Get sequence
Deep sequencing 43 reads, 3 experiments
Evidence experimental; 454 [1], Solexa [2]

Mature sequence osa-miR1846a-3p

Accession MIMAT0007789
Sequence

62 -  

ugaccccguucuccucgccgg

 - 82

Get sequence
Deep sequencing 31 reads, 3 experiments
Evidence experimental; 454 [1]

References

1
PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains" Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C Genome Res. 18:1456-1465(2008).
2
PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds" Xue LJ, Zhang JJ, Xue HW Nucleic Acids Res. 37:916-930(2009).