Stem-loop sequence osa-MIR1846d

Accession MI0008223
Description Oryza sativa miR1846d stem-loop
Gene family MIPF0000577; MIR1846
Stem-loop 
u  -  -         ac  a  a       cu -  a     u     c   c    ag 
 gc cu gucccuccc  cg gc gccggau  c cc gugag aggcc ggg cgcc  a
 || || |||||||||  || || |||||||  | || ||||| ||||| ||| ||||   
 cg ga cagggaggg  gc cg cggccua  g gg cgcuc ucugg ccc gugg  u
c  a  g         ac  -  -       -u u  c     c     c   a    cc
Get sequence
Deep sequencing
135 reads, 4 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr1: 39637065-39637180 [+]
intergenic

Mature sequence osa-miR1846d-5p

Accession MIMAT0007764
Sequence

11 -  

ucccaccgagcagccggaucuc

 - 32

Get sequence
Deep sequencing 85 reads, 2 experiments
Evidence experimental; 454 [1]

Mature sequence osa-miR1846d-3p

Accession MIMAT0007765
Sequence

87 -  

uauccggcgccgcagggagg

 - 106

Get sequence
Deep sequencing 41 reads, 2 experiments
Evidence experimental; 454 [1]

References

1
PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains" Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C Genome Res. 18:1456-1465(2008).