Stem-loop sequence hsa-mir-1827

Accession MI0008195
Symbol HGNC:MIR1827
Description Homo sapiens miR-1827 stem-loop
Gene family MIPF0000646; mir-1827
Stem-loop 
--    - a  aca    u      aaag  au   a 
  ucag c gc   gccu cagccu    ca  gag a
  |||| | ||   |||| ||||||    ||  |||  
  aguu g ug   cgga gucgga    gu  cuc g
ua    a a  --a    -      --aa  --   c
Get sequence
Deep sequencing
9 reads, 6 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr12: 100583662-100583727 [+]
antisense
OTTHUMT00000408156 ; RP11-175P13.3-001; intron 1
OTTHUMT00000408156 ; RP11-175P13.3-001; intron 1
OTTHUMT00000408156 ; RP11-175P13.3-001; intron 1
OTTHUMT00000408153 ; RP11-175P13.3-002; intron 2
OTTHUMT00000408154 ; RP11-175P13.3-004; intron 2
OTTHUMT00000408153 ; RP11-175P13.3-002; intron 2
OTTHUMT00000408154 ; RP11-175P13.3-004; intron 2
OTTHUMT00000408153 ; RP11-175P13.3-002; intron 2
OTTHUMT00000408154 ; RP11-175P13.3-004; intron 2
ENST00000548782 ; RP11-175P13.3-001; intron 1
ENST00000548782 ; RP11-175P13.3-001; intron 1
ENST00000548782 ; RP11-175P13.3-001; intron 1
ENST00000548404 ; RP11-175P13.3-002; intron 2
ENST00000550096 ; RP11-175P13.3-004; intron 2
ENST00000548404 ; RP11-175P13.3-002; intron 2
ENST00000550096 ; RP11-175P13.3-004; intron 2
ENST00000548404 ; RP11-175P13.3-002; intron 2
ENST00000550096 ; RP11-175P13.3-004; intron 2
Database links

Mature sequence hsa-miR-1827

Accession MIMAT0006767
Sequence

49 -  

ugaggcaguagauugaau

 - 66

Get sequence
Deep sequencing 9 reads, 6 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).