Stem-loop sequence hsa-mir-1825

Accession

MI0008193

Symbol

HGNC:MIR1825

Description

Homo sapiens miR-1825 stem-loop

Gene family

MIPF0000670; mir-1825

Stem-loop

a    cu    ug    gc   ccu 
 gaga  gggg  cugg  ucc   a
 ||||  ||||  ||||  |||   g
 cucu  uccc  gacc  agg   a
c    cc    gu    uc   auc 

Deep sequencing

1 reads, 1 experiments

Genome context

• Coordinates (GRCh37.p5): chr20: 30825598-30825650 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000078613 ; POFUT1-004; exon 7

  OTTHUMT00000078613 ; POFUT1-004; exon 7

  OTTHUMT00000078613 ; POFUT1-004; exon 7

  ENST00000375749 ; POFUT1-004; exon 7

  ENST00000375749 ; POFUT1-004; exon 7

  ENST00000375749 ; POFUT1-004; exon 7

Database links

• ENTREZGENE: 100302183;MIR1825
• HGNC: 35389;MIR1825

Mature sequence hsa-miR-1825

• Accession: MIMAT0006765
• Sequence: 36 - uccagugcccuccucucc - 53
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1825
  • MICRORNA.ORG:hsa-miR-1825
  • MIRDB:hsa-miR-1825
  • RNA22-HSA:hsa-miR-1825
  • TARGETMINER:hsa-miR-1825
  • TARGETSCAN-VERT:hsa-miR-1825

References

1. PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).