Stem-loop sequence cfa-mir-1842

Accession MI0008116
Description Canis familiaris miR-1842 stem-loop
Gene family MIPF0000788; mir-1842
Stem-loop 
--ug      cg     a      g  ggg 
    gcucug  agguc gcucaa gu   u
    ||||||  ||||| |||||| ||    
    cgggac  uccgg cgaguu ua   c
guug      ug     a      a  ggu
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Genome context
Coordinates (CanFam2) Overlapping transcripts
chr6: 41800426-41800485 [+]
sense
ENSCAFT00000030839 ; XM_859649.1; intron 10
antisense

Mature sequence cfa-miR-1842

Accession MIMAT0006701
Sequence

1 -  

uggcucugcgaggucagcuca

 - 21

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Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).