Stem-loop sequence cfa-mir-23a

AccessionMI0008039 (change log)
DescriptionCanis familiaris miR-23a stem-loop
Gene family MIPF0000027; mir-23
Stem-loop
   --        g    g      c  c 
5'   guuccugg gaug gauuug ug c
     |||||||| |||| |||||| || u
3'   uagggacc uuac cuaaac ac g
   uu        g    a      -  u 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CanFam3.1; GCA_000002285.2) Overlapping transcripts
chr20: 48620335-48620386 [+]
sense
ENSCAFT00000032602 ; cfa-mir-23a-201; exon 1
Clustered miRNAs
< 10kb from cfa-mir-23a
cfa-mir-23achr20: 48620335-48620386 [+]
cfa-mir-27achr20: 48620556-48620615 [+]
cfa-mir-24-2chr20: 48620684-48620745 [+]
Database links

Mature sequence cfa-miR-23a

Accession MIMAT0006640
Sequence

34 - 

aucacauugccagggauuu

 - 52

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Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).