Stem-loop sequence cfa-mir-191

Accession MI0008037
Description Canis familiaris miR-191 stem-loop
Gene family MIPF0000194; mir-191
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled miR-191. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

miR-191 is a family of microRNA precursors found in mammals, including humans. The ~22 nucleotide mature miRNA sequence is excised from the precursor hairpin by the enzyme Dicer. This sequence then associates with RISC which effects RNA interference. miR-191 has been found to be dysregulated in a large number of different types of human tumour, including those of colorectal, breast and prostate cancers. Despite these cancer links, target genes of the mature miRNA have not been characterised, and it is not known which factors lead to its dysregulation in certain tumour cells. The expression profile of miR-191 could be implemented in prognosis of acute myeloid leukaemia, with higher than average levels of miR-191 suggesting a lower survival probability.

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Stem-loop
--c          c  aa       uu  -  c 
   aacggaaucc aa  gcagcug  gu cu c
   |||||||||| ||  |||||||  || ||  
   uugcuuuagg uu  cgucgac  ua ga a
ccc          -  cg       cu  c  g 
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Genome context
Coordinates (CanFam2) Overlapping transcripts
chr20: 43143422-43143485 [+]
sense
Clustered miRNAs
< 10kb from cfa-mir-191
cfa-mir-191 chr20: 43143422-43143485 [+]
cfa-mir-425 chr20: 43143900-43143962 [+]

Mature sequence cfa-miR-191

Accession MIMAT0006638
Sequence

1 - 

caacggaaucccaaaagcagcu

 - 22

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Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:18392026 "Discovering microRNAs from deep sequencing data using miRDeep" Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N Nat Biotechnol. 26:407-415(2008).